Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P00667

Metabolite ID
P00667
Deionized mass
329.0837 Da
Average m/z
330.0904
Average RT
3.6424
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.803e-11
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)4.04e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)2.388e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.806e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.414e-13
Glyma.14G176900 SGF14K 14-3-3 protein SGF14k AT1G78300:GRF2:ral regulatory factor 2 2Chr14:43637893–43642553 (+)9.196e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.888e-12
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.426e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.804e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.704e-11
Glyma.01G017900 hypothetical protein NA 1Chr01:1734474–1735545 (+)2.434e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)2.409e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)1.854e-12
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)1.854e-12
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)7.687e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)9.923e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)8.923e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)8.417e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.628e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.806e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.806e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.806e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.806e-12
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)1.623e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.089e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.089e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.866e-15
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)3.665e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.083e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)7.134e-11
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)2.177e-12
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)1.644e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)5.061e-13
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.414e-13
Glyma.14G176600 hypothetical protein NA 1Chr14:43565478–43570243 (+)2.665e-11
Glyma.14G177100 hypothetical protein AT1G22450:COX6B:cytochrome C oxidase 6B 1Chr14:43661177–43665659 (+)8.983e-11
Glyma.14G177200 hypothetical protein AT4G09010:TL29:ascorbate peroxidase 4 1Chr14:43667263–43674131 (-)2.552e-12
Glyma.14G177500 hypothetical protein AT3G13620:PUT4:Amino acid permease family protein 1Chr14:43740577–43742476 (-)3.581e-15
Glyma.14G179900 hypothetical protein NA 1Chr14:44227886–44232217 (-)4.985e-15
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.887e-12
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)3.395e-11
Glyma.15G172900 hypothetical protein AT5G57070:AT5G57070:hydroxyproline-rich glycoprotein family protein 1Chr15:15847563–15849835 (+)1.74e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.426e-11
Glyma.18G033800 hypothetical protein NA 1Chr18:2600457–2604130 (+)1.549e-13
Glyma.18G194900 hypothetical protein NA 1Chr18:46855096–46855729 (+)6.632e-12
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)3.763e-13
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)8.93e-12
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)6.998e-11
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)2.625e-11