Overview Annotation GWAS Evidence Associated genes

P00588

Metabolite ID
P00588
Deionized mass
233.0874 Da
Average m/z
234.0963
Average RT
3.5257
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
32
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

32 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 3Chr16:35170253–35173950 (-)4.107e-12
Glyma.15G263500 hypothetical protein AT1G79440:ALDH5F1:aldehyde dehydrogenase 5F1 2Chr15:49664672–49682418 (+)5.695e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.896e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.896e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.368e-14
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)2.312e-12
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)7.033e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)7.567e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.006e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.224e-12
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)5.104e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.89e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.773e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.877e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.249e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)5.548e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)5.548e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)5.548e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)5.548e-11
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)8.565e-13
Glyma.14G135100 hypothetical protein AT4G31540:EXO70G1:exocyst subunit exo70 family protein G1 1Chr14:23623422–23626499 (-)2.999e-11
Glyma.14G135400 hypothetical protein AT2G24570:WRKY17:WRKY DNA-binding protein 17 1Chr14:23729201–23732285 (-)5.111e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)1.735e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.135e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.427e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.232e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.232e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)9.948e-13
Glyma.16G189500 hypothetical protein NA 1Chr16:35202920–35206459 (-)6.178e-12
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)3.606e-11
Glyma.19G219600 hypothetical protein NA 1Chr19:47187573–47188318 (-)1.086e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)9.654e-13