SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.20G108900

Description hypothetical protein

Gene interval Chr20:35119868–35122488 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G24175:AT4G24175:kinesin-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features544Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0055.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

544 matching features · page 29 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P32967 LysoPI(20:0/0:0) 628.3553 11.194e-11
P32974 No candidate annotation 499.7155 12.106e-13
P33001 4-methyl-3-pentenoic acid 114.0678 13.551e-12
P33036 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1495 12.068e-13
P33040 No candidate annotation 856.3490 11.081e-12
P33196 10-Deacetyltaxol-7-xyloside 943.3493 14.399e-11
P33280 (-)-Morphinan 227.1650 14.932e-11
P33310 Ternatin C5 874.1936 11.294e-11
P33461 Lucitanib 443.1838 14.418e-11
P33592 No candidate annotation 521.2494 11.455e-11