SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G026600

Description hypothetical protein

Gene interval Chr19:3303658–3312907 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G13700:PAP23:purple acid phosphatase 23

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2254Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records2254

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.0089.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2254 matching features · page 35 of 226

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P09042 Siphonol E 736.2692 21.737e-11
P09142 Olanzapine 312.1400 23.95e-14
P09170 Daphnoline 580.2617 23.477e-11
P09221 No candidate annotation 125.0522 28.633e-13
P09225 No candidate annotation 442.1761 23.474e-12
P09241 No candidate annotation 683.2025 28.378e-12
P09263 (8R,8'R,9'S)-5-Methoxyclusin 432.1802 25.82e-13
P09299 Cervinomycin A1 529.1419 22.054e-15
P09306 6Z-octenoic acid 142.0971 21.396e-14
P09334 1-(Pentafluorophenyl)propane 210.0481 26.409e-14