SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G026600

Description hypothetical protein

Gene interval Chr19:3303658–3312907 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G13700:PAP23:purple acid phosphatase 23

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2254Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records2254

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.0089.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2254 matching features · page 156 of 226

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P36599 No candidate annotation 138.0138 29.179e-11
P36609 No candidate annotation 90.0462 29.621e-11
P36634 beta-Casomorphin-7 692.3563 22.279e-11
P36657 Rediocide C 814.3627 29.219e-11
P36670 alpha-Zearalenol 320.1583 28.912e-11
P36671 Dihydralazine 190.0977 24.942e-12
P36685 S-Formylmycothiol 514.1437 24.58e-14
P36727 Cyclopentenyl propionate musk 264.2057 24.526e-15
P36728 Dihydroxytryptamine 192.0904 22.819e-11
P36733 Parguerol 16-acetate 498.1631 21.832e-11