Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36609

Metabolite ID
P36609
Deionized mass
90.0462 Da
Average m/z
91.0537
Average RT
18.2266
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
95
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

95 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 6Chr20:34757381–34771672 (+)2.15e-11
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)9.621e-11
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.349e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)6.009e-15
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 2Chr06:49315918–49324382 (+)4.779e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)1.13e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)1.13e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)1.13e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)8.201e-11
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)2.647e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 2Chr13:31727841–31735910 (-)5.623e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.281e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.901e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)5.649e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)9.621e-11
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)2.427e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.362e-13
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.758e-14
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)4.501e-11
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)4.501e-11
Glyma.04G015500 hypothetical protein AT2G33670:MLO5:Seven transmembrane MLO family protein 1Chr04:1176657–1181234 (-)9.194e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)3.563e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)7.652e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.386e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.638e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.674e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.009e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.394e-14
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)1.302e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)3.999e-13
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)6.795e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)7.242e-12
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)7.615e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.349e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.349e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)9.494e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)7.372e-15
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)5.703e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)5.703e-11
Glyma.08G211300 hypothetical protein AT1G52630:AT1G52630:O-fucosyltransferase family protein 1Chr08:17059736–17062962 (+)1.946e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)5.867e-13
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)6.494e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.298e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)5.366e-16
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)4.107e-16
Glyma.09G270000 hypothetical protein AT3G54220:SCR:GRAS family transcription factor 1Chr09:48704737–48708820 (-)6.62e-12
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)4.321e-14
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)6.386e-15
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)8.396e-15
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)1.13e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)1.13e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)1.13e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)1.13e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)1.13e-11
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)2.244e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.098e-11
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)5.451e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.736e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.736e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.736e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.736e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.269e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.982e-14
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.982e-14
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)4.053e-12
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)1.807e-11
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)5.623e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.901e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)1.333e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.333e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)1.699e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.294e-15
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.006e-13
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)6.609e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.182e-13
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.228e-11
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)6.978e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.155e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.055e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.055e-12
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)3.521e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)6.079e-11
Glyma.17G218400 hypothetical protein NA 1Chr17:36900654–36906204 (+)3.356e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.637e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.637e-13
Glyma.20G104900 hypothetical protein NA 1Chr20:34706863–34713989 (-)2.15e-11
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)3.952e-11
Glyma.20G105500 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… 1Chr20:34813357–34815998 (-)5.712e-11
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 1Chr20:34935548–34940516 (-)2.824e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.703e-14
Glyma.20G107000 hypothetical protein NA 1Chr20:34968161–34968457 (+)2.917e-11
Glyma.20G107600 hypothetical protein NA 1Chr20:35025241–35029762 (+)9.656e-11
Glyma.20G107900 hypothetical protein NA 1Chr20:35044042–35046452 (-)1.253e-12
Glyma.20G108000 hypothetical protein NA 1Chr20:35047833–35051623 (-)2.041e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)4.137e-11