SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G026600

Description hypothetical protein

Gene interval Chr19:3303658–3312907 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G13700:PAP23:purple acid phosphatase 23

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2254Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records2254

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.0089.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2254 matching features · page 149 of 226

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P35050 2-Ethoxynaphthalene 172.0876 21.956e-11
P35068 No candidate annotation 508.3543 22.007e-11
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 28.594e-13
P35073 No candidate annotation 105.0291 24.794e-14
P35079 (1E)-1-{[(Diaminomethylidene)amino]imino}-2,3-dihydro-1H-indene-4-carboximidamide 230.1274 25.596e-14
P35092 No candidate annotation 314.6285 27.069e-12
P35106 Nona-4,6-dienoylcarnitine 297.1949 23.351e-11
P35128 N-Acetylsulfamethazine 320.0994 23.007e-12
P35136 Maggiemycin 426.0953 25.716e-12
P35179 No candidate annotation 102.0458 29.119e-13