SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G258400

Description hypothetical protein

Gene interval Chr17:41248979–41254225 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G30755:AT1G30755:elongation factor G, putative (DUF668)

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features416Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

416 matching features · page 28 of 42

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 11.809e-11
P35179 No candidate annotation 102.0458 18.074e-11
P35219 Tetradenolide 214.1188 18.104e-11
P35584 Maetenoside B 1202.5971 14.067e-11
P36028 Anachelin 760.3293 14.664e-12
P36058 Hedychilactone A 318.2178 13.516e-11
P36065 PA(18:1(9Z)-O(12,13)/8:0) 576.3420 16.689e-11
P36105 No candidate annotation 275.1945 15.86e-11
P36110 1-O-(8R-hydroxy-8-methyl-3Z,9-decadienoyl)-beta-D-glucopyranose 360.1785 14.271e-11
P36294 [R-(E)]-4-(4-Methyl-3-cyclohexen-1-yl)-3-penten-2-one 178.1346 14.074e-11