SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G258400

Description hypothetical protein

Gene interval Chr17:41248979–41254225 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G30755:AT1G30755:elongation factor G, putative (DUF668)

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features416Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

416 matching features · page 2 of 42

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01090 No candidate annotation 403.5251 15.881e-11
P01578 3-Butene-1,2-diol 88.0524 14.227e-11
P01762 1-(2-Hydroxyethoxy)methyl-5-methyluracil 200.0769 13.013e-11
P01926 Hyacinthacine A4 187.1208 12.616e-11
P01978 8-Oxo-7,8-dihydrodeoxyguanine 151.0507 13.819e-11
P02197 Ponticaepoxide 182.0745 13.142e-12
P02595 N-Acetylkynurenine 250.0951 11.852e-11
P02658 5,7,3',4',5'-Pentahydroxyflavanone 304.0541 12.851e-11
P03148 Flumiclorac pentyl 423.1290 12.763e-11
P03901 Bolton-Hunter reagent 263.0762 14.793e-11