SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G258400

Description hypothetical protein

Gene interval Chr17:41248979–41254225 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G30755:AT1G30755:elongation factor G, putative (DUF668)

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features416Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

416 matching features · page 14 of 42

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P15960 5-Methylthiopentyldesulfoglucosinolate 355.1126 18.08e-12
P16079 Funebral 237.0995 15.583e-14
P16091 2-[[(2R)-2-[Bis(carboxymethyl)amino]-2-[(4,4-diphenylcyclohexyl)-hydroxyphosphoryl]oxyethyl]-[2-[bis(carboxymethyl)amino]ethyl]amino]acetic acid 707.2380 14.704e-12
P16170 N,N-Didesmethyltramadol 235.1566 18.324e-11
P16206 Talbotaflavone 540.1065 12.728e-11
P16218 No candidate annotation 905.4256 14.892e-11
P16326 Malvidin 3-O-(6-O-(4-O-malonyl-alpha-rhamnopyranosyl)-beta-glucopyranoside)-5-O-beta-glucopyranoside 886.2338 16.154e-13
P16403 4-Hydroxy-6-methyl-3-(1-oxobutyl)-2H-pyran-2-one 196.0732 18.117e-11
P16820 Petunidin 3-(6''-malonylglucoside) 564.1095 16.446e-11
P17085 No candidate annotation 1157.3246 12.84e-11