SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G216700

Description hypothetical protein

Gene interval Chr17:36510062–36519347 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features783Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records783

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

783 matching features · page 59 of 79

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P36609 No candidate annotation 90.0462 25.649e-13
P36634 beta-Casomorphin-7 692.3563 21.837e-11
P36657 Rediocide C 814.3627 25.225e-11
P36671 Dihydralazine 190.0977 29.205e-11
P36683 No candidate annotation 735.4159 29.395e-13
P36733 Parguerol 16-acetate 498.1631 26.224e-11
P36805 a-Methyldopamine 167.0947 22.311e-11
P36912 Rhodojaponin IV 454.2533 23.543e-11
P36957 Eruberin C 654.2506 27.665e-11
P37107 Amaronol A 320.0515 21.863e-12