SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G121800

Description hypothetical protein

Gene interval Chr17:9746590–9748712 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features545Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

545 matching features · page 38 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P37268 Vilaprisan 544.1705 12.843e-11
P37476 1-(2-methoxy-5Z-hexadecenyl)-sn-glycero-3-phosphoserine 511.2844 14.258e-11
P37534 Lissoclinotoxin E 570.1722 15.955e-12
P37540 PA(19:2(10Z,13Z)/20:4(5Z,8Z,11Z,13E)+=O(15)) 748.4711 17.031e-11
P37678 (-)-2,3-Dihydrocitromycetin 292.0572 19.635e-11
P38145 Tiadinil 267.0264 15.502e-11
P38156 Montanastatin 740.4093 11.932e-15
P38185 Chinenoside I 1036.5243 12.658e-14
P38406 Celapanigine 579.2456 17.813e-12
P39008 Rubuside A 632.3958 11.481e-11