SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G121800

Description hypothetical protein

Gene interval Chr17:9746590–9748712 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features545Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

545 matching features · page 2 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01978 8-Oxo-7,8-dihydrodeoxyguanine 151.0507 11.554e-12
P02133 No candidate annotation 201.0613 18.617e-11
P02878 5-Methylthio-D-ribose 180.0455 17.399e-14
P02880 No candidate annotation 183.5443 11.352e-13
P02908 3-Hydroxy-2-methylglutaric acid 162.0513 11.94e-11
P03321 (6-Aminoquinolin-2-yl) N-(2,5-dihydroxypyrrol-1-yl)-N-hydroxycarbamate 316.0832 16.029e-12
P03733 p-Hydroxyphenylacetylglycine 209.0689 11.564e-12
P03782 Kikumycin B 317.1599 14.139e-11
P03834 No candidate annotation 120.0280 18.13e-11
P03908 No candidate annotation 438.5879 14.621e-11