Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P03321

Metabolite ID
P03321
Deionized mass
316.0832 Da
Average m/z
317.0918
Average RT
7.3290
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)1.505e-13
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)4.242e-11
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)4.314e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 2Chr18:57674222–57678396 (+)9.964e-12
Glyma.19G118900 hypothetical protein NA 2Chr19:37651114–37657346 (+)5.153e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.036e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.036e-11
Glyma.02G044400 hypothetical protein NA 1Chr02:4121809–4127068 (+)4.525e-13
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.733e-14
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)1.309e-12
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)2.459e-12
Glyma.03G022300 hypothetical protein AT3G60880:DHDPS1:dihydrodipicolinate synthase 1 1Chr03:2331191–2334210 (-)1.243e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.234e-13
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)3.041e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.213e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.505e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)9.471e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)8.145e-13
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)8.145e-13
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 1Chr12:37131153–37134096 (+)1.356e-11
Glyma.12G212800 hypothetical protein NA 1Chr12:37179924–37185798 (-)7.327e-12
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)1.853e-11
Glyma.14G042600 hypothetical protein NA 1Chr14:3241648–3247355 (+)4.226e-11
Glyma.14G044000 hypothetical protein AT5G62290:AT5G62290:nucleotide-sensitive chloride conductance regulator (ICln) family protein 1Chr14:3343611–3346483 (+)9.543e-12
Glyma.14G044200 hypothetical protein NA 1Chr14:3352725–3354812 (+)2.081e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)7.832e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)7.832e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)7.831e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.113e-12
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)5.564e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)3.494e-11
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)1.254e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)2.861e-13
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)6.029e-12
Glyma.18G009800 hypothetical protein AT3G48140:AT3G48140:B12D protein 1Chr18:702106–703575 (+)7.9e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)4.295e-11
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)9.589e-12
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)9.589e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)5.841e-13
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)3.487e-12
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)3.605e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.577e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)8.83e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.759e-15