SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G121800

Description hypothetical protein

Gene interval Chr17:9746590–9748712 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features545Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

545 matching features · page 13 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P12768 No candidate annotation 883.3117 16.482e-11
P12839 2S-(6,12-dichloro-dodecanoyloxy)-propanoic acid 340.1245 17.34e-12
P13104 S-p-Coumarylglutathione 439.1444 11.537e-12
P13157 No candidate annotation 355.0983 11.409e-11
P13212 Peonidin 3-(6''-p-coumaroyl-glucoside) 5-glucoside 768.2224 17.884e-11
P13391 1-(Indol-3-yl)propanol 3-phosphate 255.0623 16.25e-11
P13413 (4-Ethylnaphthalen-1-yl)[1-(5-fluoropentyl)-1H-indol-3-yl]methanone 387.2022 11.588e-12
P13475 No candidate annotation 594.1775 15.931e-14
P13585 Imazapyr 261.1088 14.484e-12
P13637 4-Hydroxydemethylmedicarpin 272.0682 12.133e-11