Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P13157

Metabolite ID
P13157
Deionized mass
355.0983 Da
Average m/z
356.1076
Average RT
11.3756
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
63
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

63 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.123e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)4.381e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)4.381e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)4.381e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.819e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.556e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.556e-14
Glyma.17G251200 hypothetical protein NA 2Chr17:40605249–40607536 (+)8.366e-12
Glyma.18G050000 hypothetical protein NA 2Chr18:4309070–4316534 (-)5.791e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.123e-11
Glyma.02G138200 hypothetical protein NA 1Chr02:14307786–14310106 (-)5.743e-11
Glyma.02G293100 hypothetical protein AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein 1Chr02:47183443–47188007 (-)3.312e-11
Glyma.02G294900 hypothetical protein AT5G55220:AT5G55220:trigger factor type chaperone family protein 1Chr02:47300149–47306133 (+)7.915e-11
Glyma.02G295000 hypothetical protein AT4G26770:AT4G26770:Phosphatidate cytidylyltransferase family protein 1Chr02:47306160–47312036 (-)7.915e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)3.114e-11
Glyma.03G002100 hypothetical protein AT5G01930:MAN6:Glycosyl hydrolase superfamily protein 1Chr03:211934–216522 (+)2.836e-11
Glyma.03G002400 hypothetical protein AT5G25780:EIF3B-2:eukaryotic translation initiation factor 3B-2 1Chr03:234217–238375 (-)2.836e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.833e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)6.489e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)2.04e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)2.236e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.784e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)5.901e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)5.901e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.59e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.918e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.918e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.918e-12
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)9.352e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.39e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.995e-12
Glyma.06G175200 SEOd NA 1Chr06:14822478–14829186 (-)2.454e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.731e-12
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)2.824e-11
Glyma.08G227900 hypothetical protein NA 1Chr08:18551920–18567339 (-)2.004e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)1.189e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)4.381e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)4.381e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)4.381e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)4.381e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)4.381e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.115e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.819e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)6.558e-12
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)1.74e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.556e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.557e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)9.352e-14
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)4.27e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)4.875e-13
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)6.073e-13
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)8.68e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)9.274e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)1.409e-11
Glyma.17G251700 hypothetical protein NA 1Chr17:40625907–40628028 (-)9.935e-11
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)6.127e-12
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)6.128e-12
Glyma.18G050100 hypothetical protein NA 1Chr18:4323734–4329696 (+)5.109e-11
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)1.069e-11
Glyma.19G138700 hypothetical protein AT2G41740:VLN2:villin 2 1Chr19:40010487–40023584 (-)1.318e-11
Glyma.20G002800 hypothetical protein NA 1Chr20:259703–260884 (+)4.319e-11
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)5.944e-13
Glyma.20G217700 hypothetical protein AT1G32810:AT1G32810:RING/FYVE/PHD zinc finger superfamily protein 1Chr20:45347424–45357977 (-)2.105e-11