SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G218700

Description hypothetical protein

Gene interval Chr16:37608196–37613873 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G22110:DPB2:DNA polymerase epsilon subunit B2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features21Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

21 matching features · page 2 of 3

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P22069 Suplatast 327.1539 17.753e-11
P24937 N-Monodesmethyl-rizatriptan 285.1626 12.589e-11
P28421 Staudine 531.2249 11.839e-11
P32425 Meehanine J 823.3959 15.86e-11
P35533 Hypaconitine 615.3029 11.612e-11
P36334 10-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-decanoic acid 461.2436 18.054e-11
P41898 No candidate annotation 546.7256 16.459e-11
P41997 Bisglaucumlide B 738.4374 12.903e-11
P45175 Gambogoic acid B 674.3446 16.878e-12
P50998 No candidate annotation 567.4513 15.223e-11