SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G210400

Description hypothetical protein

Gene interval Chr16:36949685–36953467 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G73350:AT1G73350:ankyrin repeat protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1935Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0016.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1935 matching features · page 128 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P35543 5beta-pregnane-17alpha,20beta,21-triol-3,11-dione 364.2208 11.65e-11
P35545 No candidate annotation 616.8018 14.389e-15
P35584 Maetenoside B 1202.5971 18.079e-11
P35661 Lippidulcine A 252.1707 13.811e-13
P35669 No candidate annotation 635.4081 12.584e-11
P35761 3,13-Di-O-beta-D-glucopyranosilgeranyllinalol 630.3675 13.435e-13
P35765 Foetidissimoside A 1058.5215 11.044e-11
P35787 PG(a-25:0/PGD2) 944.6181 12.31e-17
P35845 Fluvirucin B4 603.4164 18.918e-11
P35876 PI(18:3(9Z,12Z,15Z)/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 926.4815 13.1e-13