SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G196900

Description hypothetical protein

Gene interval Chr16:35841279–35846894 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2052Overlap
Maximum supporting SNP records5
Features with ≥2 supporting SNP records1654

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4639.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2052 matching features · page 152 of 206

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P43639 17-Methyloctadecasphinganine 315.3118 21.613e-12
P43704 3'''-O-Methylfukugetin 570.1129 25.662e-11
P43719 No candidate annotation 598.3838 21.787e-11
P43814 Tetradeca-6,9,12-trienedioylcarnitine 395.2323 22.569e-11
P43885 3-O-beta-D-Glucopyranosyl hederagenin 634.4121 22.768e-12
P43976 DN-isobutylamide 436.2431 24.755e-11
P44040 2'-O-(alpha-D-Manp)-6'-O-(alpha-D-Manp)-(1,2-dioctadecanoyl-sn-glycero-3-phospho-1'-myo-inositol) 1190.6795 23.78e-11
P44113 No candidate annotation 645.4166 24.906e-11
P44241 Avermectin A2a monosaccharide 760.4380 29.703e-11
P44340 1-(6Z,9Z,12Z-octadecatrienoyl)-glycero-3-phosphoserine 519.2543 21.71e-11