SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G189500

Description hypothetical protein

Gene interval Chr16:35202920–35206459 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features182Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records44

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2418.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

182 matching features · page 15 of 19

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P42938 No candidate annotation 973.0178 15.03e-13
P43153 CDP-DG(20:3(5Z,8Z,11Z)/18:3(10,12,15)-OH(9)) 1041.5108 12.697e-11
P43166 1-heptadecanoyl-glycero-3-phosphate 424.2593 15.295e-11
P44336 Pseudouridine 244.0702 13.895e-11
P44833 Cetylpyridinium chloride 303.2891 12.613e-11
P44901 No candidate annotation 181.1161 11.943e-11
P45059 1-hexadecanoyl-2-succinyl-sn-glycero-3-phospho-(1'-sn-glycerol) 584.2964 13.052e-12
P45310 (-)-Coralloidin D 320.1997 19.922e-11
P45789 No candidate annotation 659.8314 18.599e-11
P45909 No candidate annotation 222.1575 17.337e-12