SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G189100

Description hypothetical protein

Gene interval Chr16:35170253–35173950 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G05190:emb2394:Ribosomal protein L6 family

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2739Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records142

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0997.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2739 matching features · page 208 of 274

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P39155 No candidate annotation 706.3398 14.037e-12
P39157 2-Cyanomethylene-1-glucosyloxy-3-hydroxy-4,5-dimethoxycyclohexane 375.1531 13.866e-11
P39184 Cyclopentenyl propionate musk 264.2052 16.723e-13
P39191 1,4-Divinylbenzene 130.0766 11.147e-12
P39222 Medica 16 342.2738 16.074e-14
P39232 9-Hydroxyundecanoylcarnitine 345.2478 11.448e-12
P39287 No candidate annotation 347.6953 13.371e-13
P39313 S-(9-hydroxy-PGA1)-glutathione 645.3319 14.116e-11
P39355 INDORAMIN 347.2009 11.16e-11
P39358 5,6-Dehydroalbine 230.1386 11.79e-11