SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G148400

Description hypothetical protein

Gene interval Chr16:30901868–30903453 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G45710:AT2G45710:Zinc-binding ribosomal protein family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features14Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records9

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.5714.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

14 matching features · page 2 of 2

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P12357 N1,N5,N10-Tricoumaroyl spermidine 583.2709 14.887e-11
P13866 (-)-Macrosphelide L 342.1332 13.351e-11
P17057 Reduced coenzyme F420 775.1955 17.07e-11
P28534 Hemiphroside A 668.2337 16.22e-11