SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G147900

Description hypothetical protein

Gene interval Chr16:30864919–30872425 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features926Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records880

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 3.0583.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

926 matching features · page 59 of 93

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P30962 Spongothymidine 258.0832 32.201e-11
P31005 10-methyl-11-dodecanolide 212.1740 38.636e-12
P31031 2-Acetylpyridine 121.0523 32.047e-12
P31039 1,3,4-Trimethoxy-N-methylacridone 299.1174 35.553e-11
P31079 Antibiotics XK 88-3 453.2454 39.67e-11
P31132 Amritoside B 588.2399 33.977e-11
P31215 No candidate annotation 966.3363 35.213e-11
P31220 Trichodenone A 124.0514 36.945e-12
P31267 1-Tert-butyl-3-(4-chlorophenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine 301.1109 38.032e-11
P31311 Antibiotic CJ 12371 320.1011 34.429e-11