SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G145600

Description hypothetical protein

Gene interval Chr16:30652378–30659548 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G61560:MLO6:Seven transmembrane MLO family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1593Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records310

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4231.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1593 matching features · page 47 of 160

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P07022 Melrosin A 476.1705 11.462e-11
P07035 2-Methyl-2H-1,3-benzoxazin-4(3H)-one 163.0630 11.572e-11
P07038 (3R)-3,5-dihydroxy-3-methylpentanoylcarnitine 291.1637 14.261e-18
P07051 Lincomycin hydrochloride 406.2132 11.997e-13
P07063 Suffruticoside E 622.2095 17.564e-12
P07092 AB-MECA 399.1660 15.102e-11
P07094 5-(Methoxymethyl)-1H-pyrrole-2-carbaldehyde 139.0620 18.579e-11
P07122 p-Coumaroyl-malic acid 280.0568 11.881e-14
P07147 (-)-Fumiquinazoline H 485.2065 17.748e-12
P07174 dehydro-beta-Ionone 190.1359 14.974e-11