Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P07038

Metabolite ID
P07038
Deionized mass
291.1637 Da
Average m/z
292.1714
Average RT
9.2679
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
67
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

67 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G143700 hypothetical protein AT3G50830:COR413-PM2:cold-regulated 413-plasma membrane 2 4Chr16:30388030–30390647 (-)1.256e-12
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)1.135e-12
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)1.592e-12
Glyma.16G144200 hypothetical protein AT3G50380:AT3G50380:vacuolar protein sorting-associated protein, putative (DUF1162) 2Chr16:30434508–30475458 (-)6.716e-13
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)8.625e-16
Glyma.16G145100 hypothetical protein NA 2Chr16:30578388–30581421 (-)4.261e-18
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.503e-16
Glyma.16G147400 hypothetical protein NA 2Chr16:30817535–30821568 (+)1.299e-12
Glyma.18G259000 hypothetical protein NA 2Chr18:54442402–54446789 (-)9.209e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.158e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.158e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)2.408e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)5.716e-12
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)1.209e-11
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 1Chr05:37711639–37726572 (-)1.471e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.471e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.421e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)5.75e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)2.947e-14
Glyma.06G317900 hypothetical protein AT5G51400:AT5G51400:PLAC8 family protein 1Chr06:50645095–50649256 (+)1.454e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)7.568e-11
Glyma.08G338200 hypothetical protein NA 1Chr08:45509289–45511145 (+)2.978e-11
Glyma.08G338600 hypothetical protein NA 1Chr08:45522321–45523727 (-)2.978e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)2.978e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.009e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)2.038e-11
Glyma.10G038400 hypothetical protein NA 1Chr10:3400759–3409406 (+)9.623e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.235e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.235e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.235e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.235e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.036e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)5.517e-14
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 1Chr10:46688122–46693051 (-)8.254e-12
Glyma.10G238700 hypothetical protein NA 1Chr10:46721439–46725173 (+)8.254e-12
Glyma.10G239000 hypothetical protein NA 1Chr10:46755702–46757579 (-)8.254e-12
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)3.511e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)6.508e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)6.508e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)2.799e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)4.954e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)7.41e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.589e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)7.589e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)2.057e-15
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)1.792e-12
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)2.752e-11
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)4.501e-11
Glyma.16G142800 hypothetical protein AT2G23760:BLH4:BEL1-like homeodomain 4 1Chr16:30201467–30210093 (+)3.719e-11
Glyma.16G143100 hypothetical protein AT2G23740:SUVR5:histone-lysine N-methyltransferase SUVR5 1Chr16:30245352–30261255 (-)3.719e-11
Glyma.16G143200 hypothetical protein AT5G66600:AT5G66600:electron transporter, putative (Protein of unknown function, DUF547) 1Chr16:30273151–30278680 (+)3.719e-11
Glyma.16G143600 hypothetical protein AT3G50820:PSBO2:photosystem II subunit O-2 1Chr16:30379885–30382483 (-)3.719e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)4.289e-21
Glyma.16G144300 hypothetical protein NA 1Chr16:30443185–30446450 (+)6.716e-13
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr16:30549575–30553059 (+)9.173e-13
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)3.024e-14
Glyma.16G145500 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 1Chr16:30630177–30636253 (+)3.365e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)4.261e-18
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.504e-16
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)8.379e-18
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)1.101e-11
Glyma.18G251000 hypothetical protein NA 1Chr18:53738009–53740714 (+)1.15e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.693e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)3.985e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.656e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.656e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.517e-12