SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G144700

Description hypothetical protein

Gene interval Chr16:30514629–30519598 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G66960:AT5G66960:Prolyl oligopeptidase family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features678Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records211

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.3112.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

678 matching features · page 57 of 68

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P40307 Dolaconine 419.2601 14.707e-12
P40360 Red chlorophyll catabolite 626.2751 11.695e-11
P40383 Dimethylphysostigmine 289.1734 11.873e-11
P40835 Gnidicin-20-palmitate 866.4613 13.827e-11
P40963 Leurubicin 656.2479 14.823e-13
P41062 Suspensolide D 520.2153 14.372e-12
P41067 No candidate annotation 431.2096 19.46e-11
P41112 No candidate annotation 430.6947 15.076e-14
P41158 Eriocarpin 562.2430 14.899e-11
P41280 No candidate annotation 425.6856 16.434e-11