SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G139000

Description hypothetical protein

Gene interval Chr16:29623540–29631451 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1430Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records117

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0818.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1430 matching features · page 113 of 143

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P38543 11-Hydroxynovobiocin 628.2196 11.5e-20
P38544 Allyl ether 98.0724 11.26e-11
P38580 Khivorin 586.2763 12.501e-12
P38603 No candidate annotation 593.2741 16.429e-11
P38605 Meehanine H 825.4253 14.04e-11
P38663 No candidate annotation 693.3702 12.832e-12
P38675 Dansylamidohexamethylamine 349.1842 18.6e-11
P38756 Tilmacoxib 338.1114 11.692e-11
P38804 4E,6E-undecenal 166.1338 16.207e-11
P38971 LysoPI(18:2(9Z,12Z)/0:0) 596.2964 14.213e-11