SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G139000

Description hypothetical protein

Gene interval Chr16:29623540–29631451 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1430Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records117

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0818.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1430 matching features · page 100 of 143

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P34058 UDP-L-threo-4-pentosulose 374.0961 12.442e-14
P34067 2-[5-Methoxy-2-methyl-1-[(4-methylsulfanylphenyl)methyl]indol-3-yl]propanoic acid 369.1393 11.17e-15
P34072 2,4,6-Octatriyn-1-ol 118.0414 17.268e-13
P34088 2'-O-(alpha-D-Manp)-6'-O-(alpha-D-Manp-1->6-alpha-D-Manp)-(1-heptadecanoyl-sn-glycero-3-phospho-1'-myo-inositol) 1072.4778 13.978e-12
P34116 Pyrazosulfuron-ethyl 414.0970 11.105e-12
P34206 No candidate annotation 958.3426 15.825e-11
P34228 (4Z,6Z)-Octa-4,6-dienoylcarnitine 283.1759 12.798e-12
P34282 9S,11R,15S-trihydroxy-17-phenyl-18,19,20-trinor-5Z,13E-prostadienamide 387.2400 12.561e-12
P34321 Uralsaponin F 896.4041 14.68e-11
P34329 Rhopaladin B 370.1112 11.426e-13