SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117700

Description hypothetical protein

Gene interval Chr16:26279957–26283458 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features456Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

456 matching features · page 25 of 46

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P28110 5,6,7,8-Tetrahydromethanopterin 776.2593 14.392e-12
P28276 Pantoyllactone glucoside 292.1131 11.502e-11
P28360 Reissantin B 745.2777 12.869e-11
P28413 Tabularisin A 860.2725 12.098e-13
P28508 Aralionine A 582.2851 15.189e-11
P28509 AG-3 455.1998 17.326e-11
P28537 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2638 14.055e-11
P28613 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2758 11.947e-11
P28885 Staphylopine 328.1394 16.136e-11
P28943 Nepenthone A 278.0415 17.681e-11