Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P28360

Metabolite ID
P28360
Deionized mass
745.2777 Da
Average m/z
746.2856
Average RT
15.4799
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.15e-14
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)2.962e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)3.829e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.717e-13
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)6.619e-14
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)6.33e-14
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.15e-14
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)4.758e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.95e-16
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)1.581e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.714e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.78e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.322e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)6.944e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)4.388e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)9.758e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)9.758e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)6.471e-14
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)6.166e-15
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.947e-11
Glyma.09G052400 hypothetical protein AT1G31040:AT1G31040:PLATZ transcription factor family protein 1Chr09:4583416–4589291 (-)8.83e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)7.968e-16
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)2.278e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.901e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.392e-11
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)8.84e-14
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)2.982e-13
Glyma.13G049200 hypothetical protein AT3G02440:TBL20:TRICHOME BIREFRINGENCE-LIKE 20 1Chr13:14515169–14519326 (-)2.785e-11
Glyma.13G049400 hypothetical protein AT2G20000:HBT:CDC27 family protein 1Chr13:14530308–14541307 (-)2.785e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)3.702e-13
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)8.609e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)2.708e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.991e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.957e-13
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)9.038e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)3.829e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)3.829e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)3.829e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)3.829e-12
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)2.869e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)8.46e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.198e-14
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.737e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)1.737e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.07e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.07e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.576e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.576e-13
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)2.163e-12