SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117400

Description hypothetical protein

Gene interval Chr16:26234552–26238233 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3001Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records425

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1416.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3001 matching features · page 142 of 301

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P20611 cis-1,2-Dihydroxy-1,2-dihydro-7-hydroxymethylnaphthalene 192.0788 15.565e-11
P20620 No candidate annotation 396.0681 11.346e-13
P20634 Euphoscopin F 538.2526 17.127e-11
P20641 Oxanthromicin 654.1739 18.728e-12
P20642 4-[(E)-2-(7-Heptoxy-4,4-dimethyl-1,1-dioxo-2,3-dihydrothiochromen-6-yl)prop-1-enyl]benzoic acid 484.2260 16.217e-11
P20665 2-[(beta-D-glucopyranosyloxy)methyl]-5-hydroxymethylfuran 290.0985 15.231e-12
P20683 Pibocin A 318.0712 13.73e-11
P20730 1-dodecanoyl-glycero-3-phospho-(1'-myo-inositol) 516.2330 19.762e-12
P20753 Bijaponicaxanthone 668.1551 15.43e-13
P20831 Frajunolide F 598.1752 17.802e-13