SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117400

Description hypothetical protein

Gene interval Chr16:26234552–26238233 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3001Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records425

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1416.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3001 matching features · page 128 of 301

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P17687 YC 170 487.1624 11.576e-11
P17703 Papaverine 339.1527 16.747e-11
P17738 No candidate annotation 513.7324 12.345e-12
P17744 3-Hydroxy-p-mentha-1,8-dien-7-al 166.0990 11.496e-11
P17776 2'-Dehydrokanamycin A 482.2226 11.726e-13
P17778 4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-formyl-benzoic acid 555.2364 16.282e-12
P17789 Kaempferol 3-neohesperidoside-7-(6''-malonylglucoside) 872.2263 11.026e-11
P17837 N1,N5,N10-Tricoumaroyl spermidine 583.2665 14.241e-12
P17841 Swietenidin B 205.0747 12.462e-12
P17845 Orientin 4'-O-glucoside-2''-O-rhamnoside 756.2150 13.443e-12