Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P17841

Metabolite ID
P17841
Deionized mass
205.0747 Da
Average m/z
206.0816
Average RT
12.6405
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
57
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

57 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.097e-11
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.329e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.329e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)1.149e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.573e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.573e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.853e-11
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)5.629e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)1.618e-11
Glyma.01G034300 hypothetical protein NA 1Chr01:3573149–3579461 (-)2.806e-12
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)3.471e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.748e-14
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.748e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.667e-11
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)2.077e-11
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)2.077e-11
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)2.077e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.664e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.033e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.216e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)4.169e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)4.986e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)4.986e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)1.839e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)3.688e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)3.688e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)8.782e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)8.782e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.768e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.329e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.329e-12
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)4.8e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.329e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)1.743e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.149e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)4.686e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.62e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)6.149e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)6.149e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.573e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.853e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)4.638e-12
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)6.961e-11
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)6.961e-11
Glyma.16G106200 hypothetical protein NA 1Chr16:21463300–21469532 (+)6.961e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)2.376e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.462e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.478e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)6.244e-13
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)9.825e-11
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)8.404e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)7.727e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)7.727e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)2.956e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)1.618e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.927e-11
Glyma.20G105900 hypothetical protein AT2G16990:AT2G16990:Major facilitator superfamily protein 1Chr20:34832271–34839955 (-)7.683e-13