SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G111100

Description hypothetical protein

Gene interval Chr16:24438458–24444801 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1160Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records105

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0905.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1160 matching features · page 23 of 116

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05821 Pandangolide 3 362.1408 16.1e-13
P05895 N'-Hydroxysaxitoxin 315.1269 11.765e-11
P05905 Nitrobenzylmercaptopurine 287.0454 14.605e-13
P06005 2-[(2-Fluorophenyl)sulfanylmethyl]-5-[6-[(2-hydroxycyclopentyl)amino]purin-9-yl]oxolane-3,4-diol 461.1514 14.161e-14
P06071 Proteacin 473.1514 15.161e-12
P06077 (3E)-1-[1-(4-Fluorophenyl)ethyl]-3-[[3-methoxy-4-(4-methylimidazol-1-yl)phenyl]methylidene]piperidin-2-one 419.2008 11.183e-12
P06166 Hygromycin A 511.1709 11.334e-11
P06167 Methyl (2R,3R)-2-[(3-carbamimidoylphenyl)methyl]-3-[[4-(1-oxidopyridin-1-ium-4-yl)benzoyl]amino]butanoate 446.1948 11.179e-11
P06218 Repaglinide 452.2673 11.944e-15
P06279 (-)-Indocarbazostatin B 526.1534 13.315e-11