SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G050900

Alias COL16

Description Not annotated

Gene interval Chr16:4874634–4878624 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features402Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records25

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0622.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

402 matching features · page 36 of 41

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P44193 (+)-12alpha,28-Dihydroxy-3alpha-(3'-hydroxy-3'-methylglutaryloxy)-24-methyllanosta-8,24(31)-dien-26-oic acid 646.4036 11.423e-11
P44451 Pulchellamine C 479.2179 14.604e-11
P44716 Furohyperforin 566.3946 13.556e-11
P44836 Bengamide E 358.2101 15.669e-11
P45180 No candidate annotation 199.1326 13.513e-11
P45194 Pyranoamentoflavone 604.1317 14.329e-11
P45212 Prucalopride 367.1677 12.708e-11
P45214 Sophorophenolone 298.0458 15.802e-11
P45803 Sergolexole 424.2697 17.286e-12
P46002 Albothricin 500.2704 11.543e-13