SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G025300

Description hypothetical protein

Gene interval Chr16:2438122–2440528 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features890Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

890 matching features · page 45 of 89

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P27196 Antibiotic FD 594 940.3276 14.529e-15
P27228 No candidate annotation 957.3498 12.323e-16
P27431 2,3-Dihydro-2,3-dihydroxy-9-(4-hydroxy-3-methoxyphenyl)-1H-phenalen-1-one 336.0996 11.27e-12
P27448 2alpha,3alpha-(Difluoromethylene)-5alpha-androstan-17beta-ol acetate 366.2370 14.858e-11
P27825 Lamiuside D 816.2789 18.436e-11
P27970 Isosengulone 550.1204 13.331e-13
P27983 Silodosin 495.2353 11.263e-11
P28040 Tegoprazan 387.1397 18.116e-12
P28060 Sesamol 138.0315 17.604e-11
P28133 (3beta, 5beta)-pregn-16(17)-en-3-ol-20-one 3-O-alpha-l-arabinopyranosyl-(1-4)-beta-d-glucopyranosyl-(1-2)-beta-d-glucopyranoside 772.3894 18.238e-11