SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G003200

Description hypothetical protein

Gene interval Chr16:172940–178668 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features512Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

512 matching features · page 46 of 52

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P47411 No candidate annotation 548.7589 11.688e-11
P47438 Aspergillamide A 474.2632 19.32e-11
P47441 Dehydroxychlorofusarielin B 438.2555 13.428e-12
P47529 [1R-(1alpha,4abeta,6alpha,8aalpha)]-1,2,4a,5,6,8a-Hexahydro-6-hydroxy-4,7-dimethyl-a-methylene-1-naphthaleneacetic acid methyl ester 262.1560 11.341e-11
P47540 (6Z,8Z)-Hexadeca-6,8-dienedioylcarnitine 425.2833 12.769e-11
P47544 Ancorinoside C 861.4698 11.218e-12
P47597 Saptomycin D 615.2377 11.577e-11
P47856 2,4,6-Tri-tert-butylphenol 262.2258 15.912e-11
P47983 No candidate annotation 697.4235 16.106e-11
P48009 m-Methylbenzoate 136.0532 15.649e-11