SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G003200

Description hypothetical protein

Gene interval Chr16:172940–178668 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features512Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

512 matching features · page 39 of 52

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P38639 Nicarbazin 302.0666 14.083e-12
P38652 Mollicellin M 416.0708 12.797e-11
P38765 Spenolimycin 346.1753 14.136e-11
P38973 (5Z,7E)-3-Hydroxydeca-5,7-dienoylcarnitine 327.2043 11.576e-11
P39030 4-Hydroxytrideca-7,10-dienoylcarnitine 369.2496 11.628e-11
P39100 Liangshanin C 372.1898 15.299e-12
P39131 Clobenpropit 308.0873 15.036e-11
P39215 Alstonoxine B 330.1905 12.879e-11
P39501 Epigallocatechin 3-O-(3,5-di-O-methylgallate) 486.1154 11.124e-12
P39614 Asukamycin E 534.2321 12.287e-11