SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.14G013500

Description hypothetical protein

Gene interval Chr14:1009519–1014238 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G25434:NUDT10:nudix hydrolase homolog 10

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features232Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records64

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2759.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

232 matching features · page 12 of 24

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P17311 Polyketomycin 864.2931 14.454e-11
P17649 Potassium glycerophosphate 200.0459 14.013e-11
P17893 TRIPARANOL 437.2134 14.862e-11
P18017 2H-Pyran-2-one 96.0205 17.005e-11
P18019 AH 135Y 291.1104 19.587e-12
P18865 6'-O-E-p-Methoxycinnamoylharpagide 524.1955 17.97e-12
P18937 6-octenal 126.1041 18.394e-12
P19107 No candidate annotation 862.2377 16.71e-15
P19282 Feudomycin B 541.1966 12.813e-11
P19435 2-Amino-9-(6-oxo-1H-purin-9-yl)-1H-purin-6-one 285.0697 14.272e-11