Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P17311

Metabolite ID
P17311
Deionized mass
864.2931 Da
Average m/z
865.3055
Average RT
12.5056
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.625e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.558e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)8.028e-12
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)8.019e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)9.762e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)5.459e-11
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)3.962e-11
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)3.962e-11
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)3.962e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.119e-12
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)3.008e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.159e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.281e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.28e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.281e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.909e-12
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)5.655e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)5.068e-16
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.601e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.984e-12
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr11:33497–35198 (+)2.26e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.319e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.319e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.319e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)8.313e-15
Glyma.13G156200 hypothetical protein AT1G80710:DRS1:DROUGHT SENSITIVE 1 1Chr13:27115515–27118951 (+)2.87e-11
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 1Chr14:1009519–1014238 (+)4.454e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.543e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)9.639e-12
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)6.307e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)9.373e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.493e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.088e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)1.022e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.939e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.515e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.939e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.939e-11
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)7.714e-11
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)7.548e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)6.381e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.114e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)1.539e-11
Glyma.19G128100 hypothetical protein NA 1Chr19:38728037–38732422 (+)4.153e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.328e-13
Glyma.19G247800 hypothetical protein NA 1Chr19:49385792–49388122 (-)8.502e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)5.395e-11