SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.13G203300

Description hypothetical protein

Gene interval Chr13:31727841–31735910 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G63530:BB:RING/U-box superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1087Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records247

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4609.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1087 matching features · page 14 of 109

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P27814 3'-Hydroxy-HT2 toxin 440.2056 36.978e-11
P28303 Nannochelin B 754.3070 33.963e-13
P30643 Tetralin 132.0926 33.729e-11
P31215 No candidate annotation 966.3363 35.236e-13
P31675 N-Deisopropyl-fluvastatin 369.1340 32.65e-13
P31714 4,4'-Dihydroxystilbene 212.0832 33.781e-12
P31937 No candidate annotation 173.1467 35.88e-13
P32406 Amritoside B 588.2412 31.397e-12
P33196 10-Deacetyltaxol-7-xyloside 943.3493 31.209e-16
P33955 Bernardioside B2 958.5145 31.243e-15