SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.13G134400

Description hypothetical protein

Gene interval Chr13:24677399–24693129 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2619Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records2455

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4769.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2619 matching features · page 131 of 262

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P48467 13-Apo-beta-carotenone 258.1964 32.527e-15
P48512 4,8-Dimethyl-3E,8E-decadien-10-olide 194.1272 31.735e-12
P48564 (2R)-2-[[(2R)-2-[[(2S)-2-(Azepane-1-carbonylamino)-4-methylpentanoyl]amino]-3-(1-formylindol-3-yl)propanoyl]amino]-3-(1H-indol-3-yl)propanoic acid 656.3405 32.351e-12
P48613 Emorfazone 239.1270 35.953e-13
P48666 No candidate annotation 213.1709 34.646e-13
P48752 Apronal 184.1230 31.074e-12
P48869 (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine 204.1465 39.061e-11
P48915 Noberastine 311.1744 34.317e-14
P48941 Chlorphentermine 183.0837 31.164e-13
P49100 Glucoerysodine 461.2087 32.118e-14