SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G205900

Description hypothetical protein

Gene interval Chr12:36622011–36625824 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1040Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1040 matching features · page 54 of 104

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P28898 (5E,7E)-(1S,3S)-4,4-difluoro-9,10-seco-5,7,10(19)-cholestatriene-1,3,25-triol 452.3112 18.465e-12
P28922 1-hexadecanoyl-2-(5-oxo-valeroyl)-sn-glycero-3-phospho-(1'-myo-inositol) 670.3308 12.26e-11
P29027 Bazzanin J 492.0855 12.801e-13
P29144 2-Hexyl-5-methyl-3(2H)-furanone 182.1294 11.023e-13
P29159 No candidate annotation 386.7034 11.149e-11
P29162 2-[2-[Bis(carboxymethyl)amino]ethyl-[2-[bis(carboxymethyl)amino]-3-phenylpropyl]amino]acetic acid 483.1889 19.489e-12
P29235 No candidate annotation 467.7279 12.511e-12
P29248 2-[(beta-D-glucopyranosyloxy)methyl]-5-hydroxymethylfuran 290.0975 19.774e-11
P29257 9R-hydroxy-2S,8S-dimethyl-3-oxo-2E,4E-undecadienoic acid 240.1363 18.025e-11
P29279 Cyromazine 166.0980 11.78e-11