SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G205900

Description hypothetical protein

Gene interval Chr12:36622011–36625824 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1040Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1040 matching features · page 100 of 104

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52212 2-Chloro-N-icosa-5,8,11,14-tetraenylacetamide 365.2460 11.853e-14
P52342 1,2-di-(6Z,9Z,12Z,15Z-octadecatetraenoyl)-sn-glycero-3-phospho-(1'-sn-glycerol) 762.4424 19.822e-19
P52404 No candidate annotation 879.3783 17.757e-13
P52411 No candidate annotation 558.8479 16.876e-11
P52519 Glyinflanin J 390.1798 16.814e-12
P52814 No candidate annotation 340.2742 18.221e-11
P52892 Sodwanone B 484.3178 11.377e-11
P52922 Malachite green 328.1969 15.227e-11
P52963 3,4,3',4'-Tetradehydro-psi,psi-caroten-16,16'-dial 560.3659 17.497e-11
P53010 Isopilocarpinic acid 226.1297 14.615e-11