SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G203300

Description hypothetical protein

Gene interval Chr12:36371465–36377700 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G03430:EMB2770:pre-mRNA splicing factor-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features247Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

247 matching features · page 1 of 25

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00277 1H-2-Benzopyran-7-carboxylic acid, 5-chloro-3,4-dihydro-8-hydroxy-3-methyl-1-oxo- 256.0183 11.608e-11
P01361 Arctinol 264.0284 16.282e-12
P01372 N-Sulfonyloxy-PhIP 320.0591 12.041e-11
P01733 4'-N-desmethylolanzapine 298.1240 11.244e-11
P01816 9H-Purine-9-ol 136.0401 18.304e-12
P02275 Diclosulam 404.9932 11.122e-11
P02466 Pipemidic acid 303.1331 19.167e-13
P02929 No candidate annotation 97.5036 16.94e-12
P03397 Tripterygiumine K 783.2600 16.176e-11
P03443 Benzaldehyde 106.0408 19.855e-12