SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G186300

Description hypothetical protein

Gene interval Chr12:34717587–34719271 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features128Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records63

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4922.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

128 matching features · page 7 of 13

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P45429 No candidate annotation 631.2839 25.805e-11
P45770 Sileneoside H 700.3687 22.034e-11
P46176 Ulmicin C 728.4331 21.769e-11
P00589 Lykurim 364.0967 12.473e-11
P02554 Hygrocin B 507.1927 16.733e-11
P03988 No candidate annotation 189.0592 12.683e-11
P04974 Caulerpin 398.1290 18.027e-11
P05631 Trimethyl orthoacetate 120.0775 16.578e-11
P05905 Nitrobenzylmercaptopurine 287.0454 18.539e-11
P07302 Melampyroside 450.1506 11.414e-11