SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G186200

Description hypothetical protein

Gene interval Chr12:34708678–34710549 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G44350:NAC061:NAC domain containing protein 61

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features705Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records109

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1546.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

705 matching features · page 22 of 71

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P10104 No candidate annotation 641.2594 13.986e-11
P10181 Genistein 7,4'-bis(O-glucosylapioside) 858.2449 14.409e-12
P10372 2-Methyl-1,3-pentanediol 118.0984 19.461e-11
P10378 Citrusinine II 287.0821 17.133e-11
P10507 No candidate annotation 529.2562 13.56e-11
P10553 No candidate annotation 299.1808 11.463e-11
P10595 No candidate annotation 317.1915 11.766e-13
P10655 No candidate annotation 888.1522 16.249e-11
P10660 L-gamma-Glutamyl-S-allylthio-L-cysteine 322.0663 11.745e-11
P10800 RA V 756.3531 16.103e-11