SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G186200

Description hypothetical protein

Gene interval Chr12:34708678–34710549 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G44350:NAC061:NAC domain containing protein 61

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features705Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records109

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1546.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

705 matching features · page 10 of 71

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P41800 Phlegmariurine C 520.3342 21.328e-14
P41909 No candidate annotation 97.5037 22.063e-13
P41970 N-Methylheteropsine 554.2240 27.119e-17
P42118 No candidate annotation 677.3706 28.821e-15
P42432 Phthalsaurediethylhexylester 306.1820 23.812e-16
P42443 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3412 22.877e-14
P42504 methyl 9S,11R,15S,18-tetraacetoxy-5Z,13E-prostadienoate 552.2893 29.104e-13
P42906 No candidate annotation 965.0180 25.131e-11
P43405 Scutebarbatine H 469.2041 26.721e-12
P43458 No candidate annotation 818.8998 22.434e-14