SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G095500

Description hypothetical protein

Gene interval Chr12:8023570–8027770 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G44150:AT3G44150:Expp1 protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features57Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

57 matching features · page 2 of 6

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P09047 Imazamox 305.1331 11.443e-12
P10107 Hygrocin B 507.1872 13.687e-11
P10158 Sanggenon M 436.1512 18.492e-13
P10199 Leu-Gly-Pro 285.1650 16.406e-11
P10227 2-Methylpropyl glucosinolate 375.0612 11.657e-11
P11244 Maculalactone K 532.1815 18.792e-12
P11628 9-Angeloylretronecine 237.1350 13.922e-11
P12208 2H-Benzimidazole-2-thione, 1,3-dihydro-4-methyl- 164.0438 16.135e-11
P12842 N-(1-Deoxy-1-fructosyl)phenylalanine 327.1308 16.927e-11
P13465 Polycarpine 385.1535 11.885e-12