SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G059300

Description hypothetical protein

Gene interval Chr12:4289989–4292215 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features91Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records39

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4286.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

91 matching features · page 8 of 10

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P32073 Tibouchinin 800.2208 11.335e-11
P32895 PA(5-iso PGF2VI/20:4(5Z,8Z,11Z,14Z)) 766.4415 19.668e-11
P34239 Tasumatrol E 648.2764 19.947e-11
P34836 Alloeremophilone 218.1648 12.619e-11
P34849 No candidate annotation 691.3522 14.703e-11
P37253 No candidate annotation 913.9687 16.212e-11
P37255 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3399 14.539e-11
P37352 16-{[6-O-acetyl-2-O-(6-O-acetyl-beta-D-glucopyranosyl)-beta-D-glucopyranosyl]oxy}hexadecanolide 662.3542 15.592e-11
P38335 PGP(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:2(11Z,14Z)) 926.5044 11.988e-11
P39803 2,3,4,5-tetranor-9S,11R,15S-trihydroxy-13E-prostenoic acid 300.1905 13.307e-11